Ctcf shrna
WebGenetic locus: CTCF (human) mapping to 16q22.1. PRODUCT CTCF siRNA (h) is a pool of 3 target-specific 19-25 nt siRNAs designed to knock down gene expression. Each vial … WebDec 26, 2024 · Results: We knocked down CTCF in EL4 cells using shRNA, and conducted single cell RNA-seq on both wild type (WT) cells and CTCF-Knockdown (CTCF-KD) cells using Fluidigm C1 system. Principal component analysis of single cell RNA-seq data showed that WT and CTCF-KD cells concentrated in two different clusters on PC1, …
Ctcf shrna
Did you know?
WebJun 1, 2015 · CTCF is a key regulator of nuclear chromatin structure, chromatin organization and gene regulation. The impact of CTCF on transcriptional output is quite varied, ranging from repression, to transcriptional pausing and transactivation. ... The mouse B lymphocyte cell lines Wehi-231 expressing shRNA construct Control (Wehi-CT) or a shRNA ... WebCTCF is a zinc modifying complexes, such as p300, HDACs, PRMT1 and finger protein implicated in insulator function in vertebrate polycomb complexes (15,19). YY1 is evolutionarily well con- species, and the CTCF binding sites located within H19-ICR served throughout the vertebrate and invertebrate lineages have been shown to function as an ...
WebOct 1, 2012 · The 3C assay requires large numbers of cells in which CTCF has been knocked down, precluding the use of ex vivo pro-B cells. We therefore transduced a Rag2 −/− pro–B-cell line with retroviruses expressing control or CTCF shRNA. The cells were harvested 4 d after transduction and prepared for 3C analysis. WebAug 23, 2013 · Lentiviral particles containing shRNA of CTCF tagged with a variant of green fluorescent protein (Turbo-GFP, Sigma-Aldrich, St. Louis, MO) were packaged in HEK-293T cells (17). The viral concentrations in the culture medium were titrated by PCR after cotransfection of HTCE cells with pCMV-VSV-G, psPAX2, and pGIPZshRNA-CTCF …
WebUsing 3C-based experiments in B cells where CTCF protein levels were downregulated by shRNA-mediated CTCF depletion or Mb1-Cre-mediated conditional deletion of the Ctcf gene in vivo, we and others have shown that in the absence of CTCF IgH locus contraction is only modestly affected (Degner et al., 2009) and Igκ long-range chromatin ... Web丁香通为您提供MLN4924Nedd8商品详情介绍：价格：￥11，货号：LSS-SI-9830-0001，CAS号：无，品牌：LifeSensors，详见丁香通MLN4924Nedd8商品详情页；
WebMay 21, 2024 · As shown in Figs 5C and S11, CTCF and control shRNA expressing cells showed very similar profiles of tax mRNA and RFP production. Taken together, these results suggest that loss of CTCF binding at the vCTCF-BS leads to increased viral gene expression, and that this effect is not due to loss of CTCF binding elsewhere in the host …
WebNov 30, 2024 · Inhibition of cell proliferation and clonogenicity following CTCF shRNA knockdown in K562 cells. (A) Immunoblot of CTCF shRNA knockdown in the presence and absence of doxycycline (dox) compared to ... raw bar huntington beachWebApr 10, 2024 · In parallel, an unbiased in vivo shRNA screen to identify regulatory transcription factors of memory CD8 + T cell differentiation further confirmed the role of CTCF in CD8 + T cell differentiation (Figures S3 B and S3C; Tables S4 and S5). shRNA constructs targeting CTCF were enriched in the T EM and T CM populations … rawbar chicoWebMay 5, 2024 · Deletion of CTCF attenuated adipogenesis while overexpression enhanced adipocyte differentiation, indicating CTCF is indispensable for adipogenesis. ... Sequences of shRNA oligos can be found in Supplemental Table 1. Lentiviral vectors carrying ATF4 or CTCF cDNAs were purchased from Addgene (USA) or GeneCopoeia (China). PPARγ … simple christmas buffet ideasWebFeb 11, 2024 · Temporary Family Assistance Program (TFA) provides monthly cash and employment assistance to eligible families throughout Connecticut to support basic … simple christmas brunch menu ideasWebJun 5, 2024 · CTCF shRNA and controls were analyzed by western blotting using anti-CTCF rabbit monoclonal antibody (Cell Signaling #3418) to verify knockdown. Cell counting assays were performed using Hoest staining as previously described to measure response to CTCF knockdown. For 5-aza-2′-deoxycytidine treated plates, 0.2 uM of 5-aza-2 ... simple christmas card designs to makeWebThe site navigation utilizes arrow, enter, escape, and space bar key commands. Left and right arrows move across top level links and expand / close menus in sub levels. simple christmas cakeWebMar 8, 2024 · Depletion of endogenous CTCF in the BMDCs was confirmed at the mRNA and protein levels (Fig. 1b, c).Genome-wide CTCF binding patterns, measured by ChIP … raw bar by slapfish